Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| PAAD | rs77783161 | chr1:227490374 | A/C | 3.22E-5 | 178 | 15.55 | 15.43 | 3.9 | KM Plot |
| PAAD | rs77785715 | chr11:34771805 | G/C | 8.7E-6 | 177 | 15.57 | 12.55 | 3.67 | KM Plot |
| PAAD | rs77853283 | chr2:128524613 | G/C | 7.9E-10 | 178 | 15.62 | 12.6 | 2.2 | KM Plot |
| PAAD | rs77901601 | chr7:102779054 | C/T | 1.16E-7 | 176 | 16.17 | 10.47 | 3.43 | KM Plot |
| PAAD | rs77910696 | chr11:68485824 | C/T | 8.79E-10 | 178 | 15.57 | 14.2 | 2.2 | KM Plot |
| PAAD | rs77911191 | chr12:104764039 | C/G | 1.42E-12 | 175 | 15.48 | 15.08 | 1.37 | KM Plot |
| PAAD | rs77973381 | chr1:227432753 | C/T | 3.22E-5 | 178 | 15.55 | 15.43 | 3.9 | KM Plot |
| PAAD | rs77994066 | chr8:72546907 | T/C | 4.49E-8 | 174 | 15.77 | 12.18 | 3.17 | KM Plot |
| PAAD | rs78060777 | chr1:227399528 | T/C | 3.22E-5 | 178 | 15.55 | 15.43 | 3.9 | KM Plot |
| PAAD | rs78061959 | chr1:227303004 | T/C | 3.2E-5 | 178 | 15.53 | 15.65 | 3.9 | KM Plot |
| PAAD | rs78097986 | chr11:68462818 | C/T | 1.03E-9 | 177 | 15.57 | 14 | 2.2 | KM Plot |
| PAAD | rs78115141 | chr11:68484294 | C/A | 8.79E-10 | 178 | 15.57 | 14.2 | 2.2 | KM Plot |
| PAAD | rs78211293 | chr2:70441331 | T/TA | 0 | 178 | 15.37 | 17.4 | 1.03 | KM Plot |
| PAAD | rs78220690 | chr1:227297523 | T/C | 3.2E-5 | 178 | 15.53 | 15.65 | 3.9 | KM Plot |
| PAAD | rs78236866 | chr11:34774031 | G/C | 3.06E-6 | 177 | 15.67 | 11.13 | 3.67 | KM Plot |